Microsoft 365 Migration

How to Fix OneNote Importer Errors with Large Evernote Files

Camila MilosovichCamila Milosovich Oct 29, 2026 869 views

Question details

Users encounter errors or crashes when trying to import large Evernote (ENEX) files into Microsoft OneNote.

How to Fix OneNote Importer Errors with Large Evernote Files
Product
Microsoft OneNote
Device & OS
not provided
Scenario
Migrating a large collection of notes from Evernote to Microsoft OneNote using the official or third-party importer tools.
Observed behavior
The OneNote Importer displays error messages or fails to complete the migration process due to excessive file sizes, duplicate notes, or lack of software support.
Before you start

Ensure you have a complete backup of your Evernote data exported as ENEX files to a secure location on your local drive before starting the cleanup process.

Solution 1Recommended

Clean Up and Batch Your Evernote Export

Reduce file size and complexity by removing duplicates and dividing your Evernote notes into smaller, manageable batches for import.

Because the official OneNote Importer is no longer actively supported by Microsoft, it struggles with large files and complex ENEX exports. Breaking the migration into smaller chunks significantly reduces the chance of timeout errors.

1
Review existing notes in Evernote

Open the Evernote desktop application and navigate to the notebook you wish to export.

2
Remove duplicates and obsolete notes

Manually delete any duplicate entries or outdated notes you no longer need. This will streamline the export and reduce the overall file size.

3
Select notes in small batches

Hold down the Ctrl (or Cmd on Mac) key and select a group of notes. It is highly recommended to limit each batch to a maximum of 250 notes.

4
Export as ENEX

Right-click the selected notes, choose 'Export Notes', select the ENEX format, and save the file to your computer. Repeat this for all remaining batches.

5
Import batches sequentially

Use your chosen migration tool to import each ENEX file into OneNote one by one, ensuring each batch completes successfully before starting the next.

Clean Up and Batch Your Evernote Export
Manual Transfer for Small Batches: If you discover that only a handful of notes remain after deleting duplicates and obsolete files, it may be faster and more reliable to manually copy and paste the content directly into OneNote.
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Frequently Asked Questions

Why does the OneNote Importer fail with Evernote files?

Microsoft officially discontinued support for the OneNote Importer tool. Because it no longer receives updates, it struggles to process large ENEX files or modern Evernote formatting, leading to crashes and timeout errors.

How do I export Evernote files in smaller batches?

In the Evernote application, hold down the Ctrl or Cmd key to select a specific group of notes (up to 250 is recommended). Right-click the selection, select 'Export Notes', choose the ENEX format, and save the file. Repeat this process until all notes are exported.

What is an ENEX file?

An ENEX file is the standard export format used by Evernote. It is an XML-based file that contains your text, attachments, and note metadata, allowing your data to be backed up or transferred to other applications.

Can I migrate notes if the OneNote Importer is completely broken?

Yes. If the official tool fails completely, you can utilize third-party, open-source migration tools like Evernote2Onenote, or opt to manually copy and paste the notes if your notebook volume is relatively small.