OneDrive File Issues

Fix OneDrive Personal Not Uploading Git and Obsidian Files

Camila Milosovich Sep 28, 2026 869 views

Question details

Users report that OneDrive Personal pauses or completely stops uploading when trying to sync folders containing Git repositories or Obsidian files.

Fix OneDrive Personal Stopping Uploads for Git and Obsidian Files

Product: Microsoft OneDrive Personal
Device & OS: Windows
Scenario: Attempting to back up or sync Git metadata files and Obsidian vaults using a personal OneDrive account.
Observed behavior: The synchronization process gets stuck, stalls, or continuously pauses on specific file types, even after standard repairs or reinstalling the operating system.

Before you start

Before troubleshooting, ensure that you are not actively editing files in Obsidian or running Git commands while OneDrive is attempting to sync, as active file locks can cause temporary upload pauses.

Solution 1Recommended

Prevent Simultaneous Syncing with Other Cloud Services

Ensure the Git or Obsidian folder is not being monitored by both OneDrive Personal and OneDrive for Business at the same time to prevent conflicts.

Running multiple OneDrive accounts is supported, but pointing both Personal and Business sync engines at the exact same local directory can cause deep file-locking conflicts, leading to stalled uploads.

Open OneDrive Settings

Click on the OneDrive cloud icon in your system tray (taskbar), then click the gear icon to open Help & Settings, and select 'Settings'.

Check Synced Folders

Navigate to the 'Account' tab to see exactly which local folders are being synchronized by each specific OneDrive account.

Stop Overlapping Sync

If both Personal and Business accounts are targeting your Git or Obsidian folder, click 'Stop sync' on one of the accounts to isolate the directory to a single service.

Prevent Simultaneous Syncing with Other Cloud Services

Configuration Check: Keeping your Personal and Business sync directories completely separate is the best way to ensure reliable file uploads.

Solution 2

Collect Diagnostic Logs and Contact Support

Since standard resets and Windows reinstalls often fail to fix this specific Git compatibility issue, collecting logs for Microsoft Support is necessary.

Solution 3

Exclude Git Metadata from OneDrive Sync

Git's constantly changing hidden files often disrupt cloud sync engines. Keeping them outside the OneDrive folder prevents the issue entirely.

Free Microsoft Office alternative

Try WPS Office for Seamless Document Management

If you are experiencing frustrating sync issues with Microsoft services, consider switching to WPS Office. It provides a lightweight, highly compatible alternative for your document needs with its own stable built-in cloud synchronization.

1. Download WPS Office: Visit the official WPS website to download the free installation package for your operating system.
2. Install and Sign In: Run the installer and sign in with your email or social account to activate WPS Cloud features.
3. Save and Sync: Create your documents and save them directly to WPS Cloud to avoid complex local sync conflicts.

Excellent compatibility with Microsoft Word, Excel, and PowerPoint formatsBuilt-in WPS Cloud for stable, reliable document synchronizationLightweight application that uses minimal system resourcesFamiliar user interface making migration seamless and quick

microsoft office alternative - wps office

Frequently Asked Questions

Why does OneDrive Personal get stuck on Git files?

Git creates numerous small, hidden files in the .git folder that change frequently. OneDrive's sync engine can struggle to index and upload these rapid changes simultaneously, leading to continuous pauses or stalls.

Can I use OneDrive Personal and Business on the same computer?

Yes, you can run both simultaneously. However, you must ensure they are configured to sync entirely different local directories to avoid file-locking conflicts and upload errors.

How do I find my current OneDrive version?

Click the OneDrive icon in your taskbar, select Help & Settings, click Settings, and navigate to the 'About' tab. Your exact build number will be listed there.

Will reinstalling Windows fix OneDrive sync issues with Obsidian?

Not necessarily. If the issue stems from how the OneDrive Personal engine handles specific file metadata, a full OS reinstall will not resolve the underlying compatibility problem. Submitting diagnostic logs to Microsoft is a better next step.

Document & File Issues