Fix: OneNote Desktop Shortcut Cannot Be Deleted and Reappears
Question details
The user is unable to permanently delete a OneNote shortcut from their desktop; it continuously reappears accompanied by an error message stating it cannot be deleted.

- Product
- Microsoft OneNote
- Device & OS
- Windows
- Scenario
- Attempting to clean up the desktop by removing an old or stubborn OneNote shortcut icon.
- Observed behavior
- The shortcut fails to delete and instantly reappears on the desktop, even though the related notebook is no longer visible in OneDrive or recent files.
Verify whether the item on your desktop is a standard Windows shortcut (.url or .lnk) or an actual OneNote configuration folder by right-clicking it and checking its Properties.
Delete the Shortcut Directly via the OneDrive Folder
Use this method if your Desktop is being actively backed up by OneDrive, causing local deletions to be instantly restored from the cloud.
When OneDrive sync is active on your Desktop folder, local deletions can sometimes conflict with cloud backups. Deleting the file directly from the synced folder via File Explorer often overrides this glitch.
Press the Windows key + E to launch File Explorer on your computer.
In the left-hand navigation pane, click on your 'OneDrive - [Your Name/Company]' folder, and then open the 'Desktop' folder inside it.
Locate the stubborn OneNote shortcut in this directory, click to select it, and press the Delete key on your keyboard.

End Background OneNote Processes
Use this solution if background OneNote services are locking the file and preventing it from being deleted.
Disable OneDrive Desktop Backup
Temporarily or permanently unlinking the Desktop folder from OneDrive backup will stop the cloud from restoring deleted icons.
Experience Hassle-Free Document Management with WPS Office
If persistent sync issues with Microsoft Office and OneDrive are slowing you down, consider switching to WPS Office. It offers a seamless, lightweight, and completely free alternative that gives you full control over your files without aggressive background synchronization.
- 1. Download and Install: Visit the official WPS website to download the free suite and follow the simple installation prompts.
- 2. Open Your Existing Files: Launch WPS Office and directly open your existing Office files with perfect formatting retention.
- 3. Manage Cloud Sync Optionally: Use WPS Cloud to backup documents only when you choose to, avoiding forced desktop synchronization.

Frequently Asked Questions
Why does my deleted OneNote shortcut keep reappearing on the desktop?
This usually happens because OneDrive is set to continuously back up and sync your Desktop folder. When you delete a local file, the active sync engine assumes it is missing and restores it from the cloud before the deletion command registers on the server.
How do I stop OneDrive from syncing my entire Desktop?
Click the OneDrive icon in your taskbar, navigate to Settings, select the 'Sync and backup' tab, and click 'Manage backup'. From there, you can toggle off the backup specifically for your Desktop folder.
Can I safely delete a OneNote shortcut without losing my actual notes?
Yes, deleting a standard desktop shortcut (a file ending in .url or .lnk) will not delete the actual notebook data. Your actual notes remain safely stored in your OneDrive account or local Documents folder.




