Send & Receive Issues

Fix Microsoft 365 Emails Appear Sent but Are Not Delivered

Khadija KhanKhadija Khan Nov 4, 2026 869 views

Question details

Automated emails sent from a Microsoft 365 mailbox appear in the sender's Sent Items folder but are not received by internal recipients.

How to Fix Microsoft 365 Emails Showing as Sent but Not Delivered
Product
Microsoft 365
Device & OS
not provided
Scenario
Sending automated internal emails with attachments using a script, which suddenly stopped delivering after exceeding potential threshold limits.
Observed behavior
Messages are marked as sent in the originating mailbox but do not appear in the recipient's Inbox, Junk, or Deleted Items folders due to silent drops, throttling, or quarantine rules.
Before you start

Ensure you have Exchange Administrator permissions in Microsoft 365, as troubleshooting mail flow rules, message traces, and quarantine policies requires tenant-level administrative access.

Solution 1Recommended

Run a Message Trace in the Exchange Admin Center

Running a message trace is the most reliable method to determine exactly where an internal message was delayed, dropped, or quarantined.

A message trace follows email messages as they travel through your Exchange Online organization. It will reveal if a transport rule or spam filter intercepted the automated script emails before they reached the recipient's mailbox.

1
Access Exchange Admin Center

Log in to the Microsoft 365 admin center and navigate to the Exchange Admin Center (EAC).

2
Navigate to Message Trace

In the left-hand menu, go to 'Mail flow' and select 'Message trace'.

3
Start a Trace

Click 'Start a trace', enter the sender's email address (the automated script account) and the recipient's email address, and adjust the time range to when the emails failed.

4
Analyze the Results

Review the trace results. Look for statuses like 'Failed', 'Quarantined', or 'Filtered as Spam'. Click on the specific message to view detailed delivery events and error codes.

Run a Message Trace in the Exchange Admin Center
Trace Insights: If the trace shows the message was dropped by a rule, it will specify the exact Transport Rule name, allowing you to easily adjust it.
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Frequently Asked Questions

Why do automated script emails suddenly stop delivering after working fine?

Microsoft 365 continuously monitors sending patterns. If a script sends a sudden high volume of emails or attachments, it can trigger automated outbound spam protection, causing the system to temporarily throttle or restrict the mailbox from sending further messages.

Will the sender receive a bounce-back message if they are restricted?

Normally, a Non-Delivery Report (NDR) is generated. However, if messages are silently dropped by internal transport rules or sent directly to the tenant quarantine, no bounce-back may be generated, making it look like the email was sent successfully.

Does the recipient's junk folder catch these missing internal emails?

It is possible, but if the emails are blocked at the tenant level (quarantined by Defender or dropped by transport rules), they will never reach the recipient's mailbox at all. This means they will not appear in the Inbox, Junk, or Deleted Items folders.

Can I bypass Microsoft 365 spam filtering for internal automated emails?

Yes, Exchange administrators can set up mail flow rules (transport rules) in the Exchange Admin Center to set the Spam Confidence Level (SCL) to -1 for specific internal sender IP addresses or domains, effectively bypassing spam filtering.